Makerere University consists of 10 Colleges and Jinja Campus headed by Principals and a Director respectively

Director, Jinja Campus
Principal, College of Business Management Sciences
Principal, Veterinary Medicine, Animal Resources and BioSecurity
Principal, College of Computing and Information Sciences
Principal, College of Agricultural Sciences
Principal, College of Humanities and Social Sciences
Deputy Vice Chancelllor (Fianance & Administrtion) and Principal - College of Engineering Design Art and Technology
Principal of the College of Education and External Studies
Principal, College of Natural Sciences
Principal School of Law